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Sequencing by Ligation Variation with Endonuclease V, Deoxyinosine, and SAWTooth The Sequencing Analysis Workbench Tool

Benchmark Test

Benchmark Test

Search times to map 10M paired-end tags of various sizes 14-20. Tags were artificially created from chromosome 1 to simulate speed of perfect matches, and later matched back to entire genome.

Credits: Antoine Ho – University of New Mexico